bca_survival package

Subpackages

• bca_survival.tools package
  • Submodules
    • bca_survival.tools.bca_merger module
      • merge_files()
      • main()
    • bca_survival.tools.bca_totalseg_extraction module
      • process_json_files()
      • process_totalseg_measurements()
      • process_bca_measurements()
      • main()
      • main_cli()
    • bca_survival.tools.pdf_report_extractor module
      • encrypt_pdf()
      • process_pdfs()
      • main()
    • bca_survival.tools.results_converter module
      • create_output_folders()
      • convert_to_csv()
      • convert_to_txt()
      • convert_to_pdf_win32()
      • convert_to_pdf_fpdf()
      • convert_excel_file()
      • process_directory()
      • main()
  • Module contents

Submodules

• bca_survival.analyzer module
  • BCASurvivalAnalyzer
    • BCASurvivalAnalyzer.df
    • BCASurvivalAnalyzer.df_negative_days
    • BCASurvivalAnalyzer.start_date_col
    • BCASurvivalAnalyzer.event_date_col
    • BCASurvivalAnalyzer.event_col
    • BCASurvivalAnalyzer.standardize
    • BCASurvivalAnalyzer.preprocess_data()
    • BCASurvivalAnalyzer.univariate_cox_regression()
    • BCASurvivalAnalyzer.kaplan_meier_plot()
    • BCASurvivalAnalyzer.multivariate_cox_regression()
• bca_survival.models module
  • standardize_columns()
  • check_multicollinearity()
  • perform_multivariate_cox_regression()
  • perform_univariate_cox_regression()
  • generate_kaplan_meier_plot()
  • calculate_vif()
• bca_survival.preprocessing module
  • calculate_days()
  • check_and_remove_negative_days()
  • create_event_date_column()
  • compute_ratios()
• bca_survival.utils module
  • make_quantile_split()
  • make_quantile_split_outter_vs_middle()
  • calculate_age()
  • clean_dates()

Module contents